- Rana ML, Ullah MA, Hoque MN, Hassan J, Siddique MP, Rahman MT. (2025). Preliminary survey of biofilm, antibiotic resistant Escherichia coli in fishes from land based acquaculture systems and open water bodies in Bangladesh. Sci Rep, 15(1): 7811. doi: 10.1038/s41598-024-80536-6.
- Hassan J, Bag MAS, Karmakar S, Utsho KS, Ali MW, Kabir A, Rahman MT. (2025) Genomic features and pathogenic potential of Streptococcus agalactiae isolated from bovine clinical mastitis. J Adv Vet Anim Res, 12(1): 80-89. doi: 10.5455/javar.2025.1874.
- Islam MN, Khan MK, Hassan J, Nahar MS, Khan MFR, Islam MA, Rahman AKMA. (2024). Reversible zoonotic transmission of tuberculosis from humans to dairy cattle in Bangladesh. Int J Tuberculo Lung Dis, 29(3): 1-8. doi: 10.5588/ijtld.24.0368.
- Hassan J, Utsho KS, Karmakar S, Ali MW, Awasthi SP, Uyama C, Hatanaka N, Yamasaki S, Hinenoya A. (2025). Occurrence and cross contamination of Escherichia albertii in retail chicken outlets in Bangladesh. Int J Food Microbiol, 431(2025): 111081. doi: 1016/j.ijfoodmicro.2025.111081.
- Ullah MA, Islam MS, Rana ML, Hassan J, Rahman MT. (2025). Genomic insight into a strong biofilm-forming Enterococcus faecalis MTR_EFS01 strain isolated from a shrimp in Bangladesh. Anim Res One Health, 00: 1-10. doi: 10.1002/aro2.101.
- Sigma SH, Ashraf MN, Karmakar S, Rimi SS, Chakraborty S, Siddique MP, Hassan J, Islam MA, Rahman MT, Islam MS, Hossain MT. (2024). Antimicrobial resistance, pathogenicity and virulence patterns of Escherichia coli isolated from cockroaches (Blattella germanica) across diverse environments: a public health concern. bioRxiv preprint. Doi:10.1101/2024.12.29.630637
- Ullah MA, Islam MS, Ferdous FB, Rana ML, Hassan J, Rahman MT. (2024). Assessment of prevalence, antibiotic resistance, and virulence profiles of biofilm-forming Enterococcus faecalis isolated from raw seafood from Bangladesh. Heliyon, 10(2024): e39294. doi: 10.1016/j.heliyon.2024.e39294.
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Hassan J, Hinenoya A, Hatanaka N, Awasthi SP, Goutham BM, Rahman N, Yamate J, Nakamura S, Motooka D, Nagita A, Faruque SM, Yamasaki S. (2024). A plasmid mediated type three secretion system associated with invasiveness and diarrheagenicity of Providencia rustigianii". mBio, e0229724. doi: 10.1128/mbio.02297-24.
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Ballah FM, Hoque MN, Islam MS, Faisal GM, Rahman AMT, Khatun MM, Rahman M, Hassan J, Rahman MT. (2024). Genomic insights of a methicillin-resistant biofilm-producing Staphylococcus aureus strain isolated from food handlers. BioMed Res Int 2024(1): 5516117. doi: 10.1155/2024/5516117.
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Ali MW, Karmakar S, Utsho S, Kabir A, Arif M, Islam MS, Rahman MT, Hassan, J. (2024). First detection and characterization of mcr-1 colistin resistant E. coli from wild rat in Bangladesh. PLoS One 19(5): e0296109. doi: 10.1371/journal.pone.0296109.
- Awasthi SP, Nagita A, Hatanaka N, Hassan J, Xu B, Hinenoya A, Yamasaki S. (2024). Detection of prolong excretion of Escherichia albertii in stool specimens of a 7-year-old child by a newly developed Eacdt gene-based quantitative real-time PCR method and molecular characterization of the isolates. Heliyon, doi: 10.1016/j.heliyon.2024.e30042.
- Royal SS, Sigma SH, Ashraf MD, Rimi SS, Affroze S, Yousup S, Hassan J, Siddique MP, Islam MS. (2024). Isolation and molecular detection of antibiotic resistant Staphylococcus aureus from pet birds of Mymensingh city corporation areas, Bangladesh. Am J Microbiol Res, 12(1):1-6. doi: 10.12691/ajmr-12-1-1.
- Kabir A, Habib T, Chouhan CS, Hassan J,Rahman AKMA, Nazir KHMNH. (2023). Epidemiology and molecular characterization of Feline panleukopenia virus from suspected domestic cats in selected Bangladesh regions. PLoS One,18(10): e0282559. doi: 10.1371/journal.pone.0282559.
- Ballah FM, Islam MS, Ievy S, Ferdous FB, Sobur MA, Rahman AT, Rahman M, Haque MN, Hassan J, Rahman MT. (2023). Draft genome sequence of biofilm-forming methicillin-resistant Staphylococcus aureus MTR_V1 strain isolated from a ready-to-eat food in Bangladesh. Microbiol Resour Announc, e0059723. doi: 10.1128/MRA.00597-23.
- Ballah FM, Islam MS, Rana ML, Khatun MM, Rahman M, Hassan J, Rahman MT. (2023). Draft genome sequence of Staphylococcus gallinarumBAU_KME002 strain isolated from egg surface in Bangladesh. Microbiol Resour Announc, 12(10): e0055523. doi: 10.1128/MRA.00555-23.
- Ullah MA, Islam MS, Rana ML, Ferdous FB, Neloy FH, Punom SA, Hassan J, Rahman MT. (2023). Draft genome sequence of biofilm-forming Enterococcus faecalis BAU_Ef01 strain isolated from shrimp (Penaeus indicus) in Bangladesh. Microbiol Resour Announc. 18:e0055123. doi: 10.1128/MRA.00551-23.
- Ullah MA, Islam MS, Rana ML, Ferdous FB, Neloy FH, Firdous Z, Hassan J, Rahman MT. (2023). Resistance Profiles and Virulence Determinants in Biofilm-Forming Enterococcus faeciumIsolated from Raw Seafood in Bangladesh. Pathogens, 12(9): 1101. doi: 10.3390/pathogens12091101.
- Hassan J, Bag MAS, Ali MW, Kabir A, Hoque MN, Hossain MM, Rahman MT, Islam MS, Khan MSR (2023). Diversity of Streptococcus spp. and genomic characteristics of Streptococcus uberis isolated from clinical mastitis of cattle in Bangladesh. Front Vet Sci, 10:1198393. doi: 10.3389/fvets.2023.1198393.
- Ferdous FB, Islam MS, Ullah MA, Rana ML, Punom SA, Neloy FH, Chowdhury MNU, Hassan J, Siddique MP, Saha S, Rahman MT. (2023). Antimicrobial Resistance Profiles, Virulence Determinants, and Biofilm Formation in Enterococci Isolated from Rhesus Macaques (Macaca mulatta): A Potential Threat for Wildlife in Bangladesh? Animals (Basel). 13(14):2268. doi: 10.3390/ani13142268.
- Hassan J, Awasthi SPA, Hatanaka N, Hoang PH, Nagita A, Hinenoya A, Faruque SM, Yamasaki S (2023). Presence of functionally active cytolethal distending toxin genes on a conjugative plasmid in a clinical isolate of Providencia rustigianii. Infect Immun, e0012122. doi: 10.1128/iai.00121-22.
- Islam MS, Rahman AMMT, Hassan J,Rahman MT. (2023). Extended-spectrum beta-lactamase in Escherichia coli isolated from humans, animals, and environments in Bangladesh: A one health perspective systematic review and meta-analysis. One Health, 16: 100526. doi: 10.1016/j.onehlt.2023.100526.
- Ali MW, Utsho KS, Karmakar S, Hoque MN, Rahman MT, Hassan J (2023). First report on the molecular characteristics of mcr-1 colistin resistant E. coli isolated from retail broiler meat in Bangladesh. Int J Food Microbiol, 388: 110065. doi: 10.1016/j.ijfoodmicro.2022.110065.
- Khan MSR, Khan I, Bag MAS, Uddin M, Hassan MR, Hassan J (2022). Deep learning-based bacterial genus identification. J Adv Vet Anim Res, 9(4): 573-582. doi: 10.5455/javar.2022.i626.
- Bag MAS, Arif M, Riaz S, Khan MSR, Islam MS, Punom SA, Ali MW, Begum F, Islam MS, Rahman MT, Hassan J (2022). Antimicrobial resistance, virulence profiles, and public health significance of Enterococcus faecalis isolated from clinical mastitis of cattle in Bangladesh. BioMed Res Int, 2022: 8101866. doi: 10.1155/2022/8101866.
- Ievy S, Hoque MN, Islam MS, Sobur MA, Ballah FM, Rahman MS, Rahman MB, Hassan J, Khan MFR, Rahman MT (2022). Genomic characteristics, virulence and antimicrobial resistance in avian pathogenic Escherichia coli MTR_BAU02 strain isolated from layer farms in Bangladesh. J Glob Antimicrob Resist, 4: S2213- 7165(22)00134-5. doi: 10.1016/j.jgar.2022.06.001.
- Ahammad AKS, Asaduzzaman M, Ferdusy T, Islam MM, Wong L, Rahman MM, Haque MM, Hassan J (2022). Morphological diversity of the selected hatchery populations of an Indian major carp (Labeo rohita, Hamilto, 1822) in the Mymensingh region of Bangladesh. Agri Gene, 25: 1-11. Doi: 1016/j.angen.2022.200131
- Mili SA, Islam S, Sabuj AAMS, Haque ZF, Pondit A, Hossain G, Hassan J, Saha S (2022). A cross-sectional seroepidemiological study on Infectious Bursal disease in backyard chickens in the Mymensingh district of Bangladesh. Vet Med Int, 2022: 9076755. doi: 10.1155/2022/9076755.
- Khan MK, Islam MN, Hassan J, Paul SK, Islam MA, Pateras K, Kostoulas P, Ward MP, Rahman AKMA, Alam MM (2022). Hierarchical true prevalence, risk factors and clinical symptoms of tuberculosis among suspects in Bangladesh. PLoS One, 17(7): e0262978. doi: 10.1371/journal.pone.0262978.
- Alam ME, Kamal MM, Rahman M, Kabir A, Islam MS, Hassan J (2022). Review of anthrax: A disease of farm animals. J Adv Vet Anim Res, 9(2): 323-334. doi: 10.5455/javar.2022.i599.
- Hinenoya A, Awasthi SPA, Yasuda N, Nagano K, Hassan J, Takehira K, Hatanaka N, Saito S, Watabe T, Yoshizawa M, Inoue H, Yamasaki S. (2022). Detection, isolation and molecular characterization of Escherichia albertii in wild birds in West Japan. Jpn J Infect Dis, 75(2):156-163. doi: 10.7883/yoken.JJID.2021.355.
- Ahmed NU, Khan A, Hassan J, Khan MAHNA, Rahman AKMA, Hoque W, Rahman M, Kobayashi N, Ward MP, Alam MM (2022). Risk factors for bovine rotavirus infection and genotypes of bovine rotavirus in diarrheic calves in Bangladesh. PLoS One, 17(2): e0264577. doi: 10.1371/journal.pone.0264577.
- Hossain MJ, Attia Y, Ballah FM, Islam MS, Sobur MA, Islam MA, Ievy S, Rahman A, Nishiyama A, Islam MS, Hassan J, Rahman MT (2021). Review: Zoonotic significance and antimicrobial resistance in Salmonella in poultry in Bangladesh for the period of 2011-2021. Zoon Dis, 1: 3-24. doi: 3390/zoonoticdis1010002
- Bag MAS, Khan MSR, Sami MDH, Begum F, Islam MS, Rahman MM, Rahman MT, Hassan J. (2021). Virulence determinants and antimicrobial resistance of E. coli isolated from bovine clinical mastitis in some selected dairy farms of Bangladesh. Saudi J Biol Sci 28(11):6317-6323. doi: 10.1016/j.sjbs.2021.06.099.
- Le PQ, Awasthi SP, Hatanaka N, Hinenoya A, Hassan J, Ombarak RA, Iguchi A, Tran NTT, Dao KVT, Vien MQ, Le HX, Do HT, Yamamoto Y, Yamasaki S. (2021). Prevalence of mobile colistin resistance (mcr) genes in extended-spectrum β-lactamase-producing Escherichia coli isolated from retail raw foods in Nha Trang, Vietnam. Int J Food Microbiol, 346: 109164. doi: 10.1016/j.ijfoodmicro.2021.109164.
- Nguyen DTA, Awasthi SP, Hoang PH, Nguyen PD, Hassan J, Hatanaka N, Hinenoya A, Dang CV, Faruque SM, Yamasaki S (2021). Prevalence, serovar and antimicrobial resistance of non-typhoidal Salmonella in vegetable, fruit and water samples in Ho Chi Minh City, Vietnam. Foodborne Pathog Dis,18(5): 354-363. doi: 10.1089/fpd.2020.2891.
- Punom SA, Khan ST, Rahman S, Hassan J, Mahmud MM, Khan MSR, Islam MS. (2020). Isolation and molecular-based identification of bacteria from unhatched leftover eggs of ducks in selected mini-hatcheries of Kishoreganj, Bangladesh. J Adv Vet Anim Res, 7(1): 164-169. doi: 10.5455/javar.2020.g406.
- Hassan J, Awasthi SP, Hatanaka N, Okuno K, Hoang PH, Nagita A, Hinenoya A, Yamasaki S. (2018). Development of a multiplex PCR targeting eae, stxand cdt genes in genus Escherichia and detection of a novel cdtB gene in Providencia rustigianii. Pathog Dis, 76(9). doi: 10.1093/femspd/ftz002.
- Nahar A, Awasthi SP, Hatanaka N, Okuno K, Hoang PH, Hassan J, Hinenoya A, Yamasaki S (2018). Prevalence and characteristics of extended-spectrum β-lactamase-producing Escherichia coliin domestic and imported chicken meats in Japan. J Vet Med Sci, 80(3): 510-517. doi: 10.1292/jvms.17-0708.
- Hinenoya A, Tran STT, Nguyen NT, Nguyen HC, Nguyen DDL, Hoang PH, Awasthi SP, Hassan J, Sumimura Y, Yamamoto Y, Yamasaki S (2018). Isolation and molecular characterization of extended-spectrum β-lactamase (ESBL) producing Escherichia colifrom industrial food animals in Mekong Delta, Vietnam. J J Vet Res, 66(1): 1-12. doi: 10.14943/jjvr.66.1.1
- Parvej MS, Mamun M, Hassan J, Mahmud MM, Rahman M, Rahman MT, Rahman MB, Nazir KHMNH (2018). Prevalence and characteristics of Shiga-toxin producing Escherichia coli(STEC) isolated from beef slaughterhouse. J Adv Vet Anim Res, 5(2): 218-225. doi: 10.5455/JAVAR.2018.E271.
- Hassan J, Nazir KHMNH, Parvej MS, Kamal T, Rahman MT (2017). Molecular based prevalence of shigatoxigenic Escherichia coli in rectal swab of apparently healthy cattle in Mymensingh district, Bangladesh. J Adv Vet Anim Res, 4(2): 194-199. doi: 10.5455/javar.2017.d213.
- Mahmud MM, Hassan J,Nazir KHMNH (2017). Internal transcribed spacer based identification of Aspergillus fumigatus isolated from poultry feed samples. Res Agric Livest Fish, 4(3): 165-171. doi: 10.3329/ralf.v4i3.35093.
- Mamun MM, Hassan J, Nazir KHMNH, Islam MM, Zesmin K, Rahman MB, Rahman MT (2017). Prevalence and molecular detection of quinolone resistant coliin rectal swab of apparently healthy cattle in Bangladesh. Int J Trop Dis Health, 24(2): 1-7. doi: 10.9734/IJTDH/2017/34404.
- Mamun MM, Parvej MS, Ahmed S, Hassan J, Nazir KHMNH, Nishikawa Y, Rahman MT (2016). Prevalence and characterization of Shigatoxigenic Escherichia coliin broiler birds in Mymensingh. Bangl J Vet Med, 14(1): 5-8. doi: 10.3329/bjvm.v14i1.28809.
- Hassan J, Ahsan MM, Rahman MB, Chowdhury SMZH, Parvej MS and Nazir KHMNH (2015). Factors associated with repeated outbreaks of anthrax in Bangladesh: qualitative and quantitative study. J Adv Vet Anim Res, 2(2): 158-164. doi: 10.5455/javar.2015.b72.
- Hassan J, Rahman MB, Chowdhury SMZH, Rabidas SK, Parvej MS and Nazir KHMNH (2015). ELISA based anthrax antibody titer in cattle induced by locally prepared anthrax vaccine originated from sterne F-24 strain in Bangladesh. Microb Health, 4(1): 36-38.
- Nazir KHMNH, Hassan J, Chowdhury SMZH and Rahman MB (2015). Novel multiplex-PCR for rapid detection of Bacillus anthracisspores present in soils of Sirajganj district in Bangladesh. Progres Agric, 26: 67-70.
- Islam M, Hassan J, MSR Khan (2014). Seroprevalence of Mycoplasma gallisepticuminfection in backyard and commercial layer chickens in Bhola district, Bangladesh. J Adv Vet Anim Res, 1(1): 11-15. doi: 10.5455/javar.v1i1p11-15.
- Nazir KHMNH, Hassan J, Durairaj P and Yun H (2014). Isolation and identification of Aspergillus flavusfrom poultry feed samples using combined traditional-molecular approach and expression of CYP64A1 at mRNA level. Pak J Agri Sci, 51(2): 287-291.
- Hassan J, Parvej MS, Rahman MB, Khan MSR, Rahman MT, Kamal T, Nazir KHMNH (2014). Prevalence and characterization of Escherichia colifrom rectal swab of apparently healthy cattle in Mymensingh, Bangladesh. Microb Health, 3(1): 12-14.
- Hassan MK, Islam M, Hassan J, Ghose JK, Islam MA, Khan MSR (2014). Isolation and identification of bacteria associated with skin lesions of cattle reared in sadar upazila of Mymensingh. Int J BioRes, 1(4): 01-06.
- Ahsan MM, Khan MFR, Rahman MB, Hassan J, Chowdhury SMZH, Parvej MS, Jahan M, Nazir KHMNH (2013). Investigation of Bacillus anthracis spore in soil and analysis of environmental parameters related to repeated anthrax outbreak in Sirajganj, Bangladesh. Thai Vet Med, 43(3): 449-454.
- Modak M, Amin MM, Saha S, Hassan J (2012). Immunogenicity of BAU-Bivalent Salmonella and Fowl Cholera Vaccines in Shuvra Chickens. Microb Health, 1(2): 50-53.
- Ghose JK, Rahman MM, Hassan J, Khan MSR, Alam MA (2012). Knowledge and practicing behavior related to personal hygiene among the secondary school students of Mymensingh sadar upazilla, Bangladesh. Microb Health, 1(1): 34-37.
- Rahman N, Khan MSR, Amin MM, Siddique MP, Hassan J, Parvin K (2012). Isolation and Characterization of Salmonella Serovars from Buffaloes in Mymensingh, Bangladesh. Microb Health, 1(2): 62-64.
- Roy SR, Rahman MB, Hassan J, Nazir KHMNH (2012). Isolation and identification of Bacterial flora from internal organs of Broiler and their antibiogram studies. Microb Health, 1(2): 72-75.
- Singh A, Khan MSR, Saha S, Hassan J, Roy U (2012). Isolation and Detection of Antibiotic Sensitivity Pattern of Escherichia coli from Ducks in Bangladesh and Nepal. Microb Health, 1(1): 6-8.
- Paul SK, Khan MSR, Rashid MA, Hassan J, Mahmud SMS (2010). Isolation and characterization of Escherichiacoli from Buffalo calves in some selected areas of Bangladesh. Bangl J Vet Med, 8(1): 23-26.
- Ferdous J, Khan MSR, Begum F and Hassan J,Sarker B (2010). Comparative Immunogenicity of BioTyphoid and Fowl Typhoid vaccine in layer chicken. Bangl J Vet Med, 8(1): 1-4.
- Abdullah ASM, Khan MSR, Alam M, Haq F, Hassan J (2010). Isolation and molecular characterization of Escherichia coli from goats of apparently healthy and clinical cases. Bangl J Microbiol, 27(1): 14-17.
- Islam MS, Khan MSR, Islam MA, Hassan J, Affroze S, Islam MA (2010). Isolation and characterization of infectious laryngotracheitis virus in layer chickens. Bangl J Vet Med, 8(2): 123-130.
- Al-Amin M, Khan MSR, Begum F, Hassan J, Asaduzzaman M (2009). Isolation and characterization of bacterial species from enteric fever suspected human cases of Mymensingh Medical College Hospital. Progres Agric, 20 (1&2): 85-92.
- Ferdous J, Khan MSR, Begum F, Hassan J (2009). Immunogenicity of Fowl Typhoid vaccine in Layer chickens. J Bangl Agric Uni, 7(1): 99-102.
- Paul SC, Khan MSR, Amin MM, Begum F, Hassan J, Islam MS (2009). Characterization of Salmonellaisolated from pigs of Sadar Upazilla of Mymensingh District. Bangl J Vet Med, 7(1): 281-286.
- Hassan J, Khan MSR, Rahman MA, Islam MS, Begum F (2009). Investigation of bacterial load of egg, fish and mango juices collected from the market in and around Bangladesh Agricultural University. Int J BioRes, 6(5): 83-87.